I have finished day one of the Bodega Phylogenetics Workshop
and am not disappointed. The first
day of lectures started with John Huelsenbeck covering continous-time markov
models as well as a little about Bayesian inference and some ideas about
biogeography. This was followed by
a super quick crash course in model selection, Mr Bayes and some thoughts on
model adequacy by Jeremy Brown. After
dinner we went back to the lecture hall and listened to Bruce Rannala who
discussed history and data size issues in resolving large phylogenetic
trees. Between those
lectures we had a coffee breaks and 2 meals where all of the faculty mentioned
plus many others were available to discuss our ideas and thoughts.
After breakfast this morning we have divergence time
estimation with Beast by Tracy Heath.
Then we have species tree estimation and *Beast with Bob Thompson. Tonight we will have next generation
sequencing technology with Johnathan Eisen. One interesting part of this workshop is the student
presentations. So on Friday we
have to get up and give presentations of something that we have done while we
have been here at Bodega. Finding
the right size of project is difficult.
You don’t want it to be trivial but at the same time Friday is not very
far away….

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